Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs35451113 | chr16:20475550 | G/T | 0.000386 | 210 | 16.43 | 13.6 | 5.88 | KM Plot |
| KIRP | rs35456310 | chr10:63426703 | ATAT/A | 0 | 212 | 18.03 | 5.57 | 3.38 | KM Plot |
| KIRP | rs35473891 | chr16:20445024 | T/C | 0.000335 | 214 | 16.47 | 15.02 | 1.73 | KM Plot |
| KIRP | rs35480601 | chr4:76613353 | CT/C | 0.000228 | 207 | 13.8 | 17.12 | 14.28 | KM Plot |
| KIRP | rs35480825 | chr19:8426644 | CTT/C | 0.000133 | 206 | 14.87 | 17.47 | 11.43 | KM Plot |
| KIRP | rs35491132 | chr6:27527227 | GT/G | 1.97E-7 | 214 | 16.5 | 12 | 9.77 | KM Plot |
| KIRP | rs35496510 | chr10:63374467 | C/A | 0 | 212 | 18.25 | 9 | 1.17 | KM Plot |
| KIRP | rs35501037 | chr6:27739566 | T/A | 1.97E-7 | 213 | 16.53 | 12 | 9.77 | KM Plot |
| KIRP | rs35535623 | chr5:176629296 | A/G | 4.92E-7 | 212 | 15.33 | 20.53 | 4.93 | KM Plot |
| KIRP | rs35570648 | chr10:70687418 | A/G | 7.43E-9 | 214 | 14.87 | 18.77 | 9.77 | KM Plot |
| KIRP | rs35576383 | chr14:96055670 | A/AT | 1.01E-6 | 212 | 14.83 | 26.57 | 9.77 | KM Plot |
| KIRP | rs35602225 | chr4:76558221 | C/T | 9.37E-6 | 210 | 14.32 | 17.12 | 14.73 | KM Plot |
| KIRP | rs35616070 | chr10:102003579 | C/G | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs35632562 | chr10:63392415 | C/CT | 7.46E-5 | 206 | 19.27 | 10.3 | 1.98 | KM Plot |
| KIRP | rs35656932 | chr6:28191288 | G/T | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |